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Ass. Lect. Ahmed Mohamed Alhussaini Ali Abdel Rahman Hamad :: Publications:

Title:
Molecular Docking analysis of the antibacterial effect of pomegranate (Punica granatum) fruit molasses bioactive compounds
Authors: Hanaa S. Bekir, Ahmed Hamad, Nesreen Z. Eleiwa, Reham A. Amin
Year: 2024
Keywords: Meat Quality; Molecular Docking; Antibacterial effect
Journal: Benha Veterinary Medical Journal
Volume: 46
Issue: 2
Pages: 90-95
Publisher: Benha Veterinary Medical Journal
Local/International: Local
Paper Link:
Full paper Ahmed Mohamed Alhussaini Ali Abdel Rahman Hamad_BVMJ_Volume 46_Issue 2_Pages 90-95.pdf
Supplementary materials Not Available
Abstract:

Pomegranate molasses is a one of functional element that has generated extensive scientific attention in the search for effective bioactive natural compounds. The in-silico effects of pomegranate molasses on foodborne pathogens were investigated using molecular docking analysis, using the crystal structures of E. coli topoisomerase II DNA gyrase B as a target model. On the ATP-active pocket of E. coli DNA gyrase, the binding affinities and interactions of alliance acid, gallic acid, punicalagin, and punicalin were examined. According to the findings, novobiocin had a docking score of -6.30 Kcal/mol, whereas the bioactive components of the pomegranate molasses (punicalagin, punicalin, gallagic acid, and ellagic acid) adopted the best binding style with a score of -7.2 to -9.8 Kcal/mol. Our findings suggested that pomegranate molasses could provide powerful antibacterial agents and DNA gyrase inhibitors via unique structural properties that address antimicrobial resistance. They are being investigated further as a natural biocontrol agent.

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